[#79676] FAILED libmesh.git=real-0.7.3-alt3.svn20120228 ...

[#79676] FAILED libmesh.git=real-0.7.3-alt3.svn20120228 ...

[Girar Builder robot]

http://git.altlinux.org/tasks/79676/logs/events.1.1.log

2012-Sep-11 16:03:40 :: task #79676 for sisyphus started by real:
#100 build real-0.7.3-alt3.svn20120228 from /people/real/packages/libmesh.git
#200 build complex-0.7.3-alt3.svn20120228 from /people/real/packages/libmesh.git
2012-Sep-11 16:03:59 :: created build repo
2012-Sep-11 16:04:01 :: [x86_64] #100 libmesh.git real-0.7.3-alt3.svn20120228: build start
2012-Sep-11 16:04:01 :: [i586] #100 libmesh.git real-0.7.3-alt3.svn20120228: build start
mpicxx -DNDEBUG -g  -g -DHAVE_CONFIG_H -DPETSC_USE_DYNAMIC_LIBRARIES -O2 -felide-constructors -fPIC -funroll-loops -fstrict-aliasing -Wdisabled-optimization -g -pipe -Wall -g -O2 -DOMPI_IGNORE_CXX_SEEK -DHAVE_NOX -I/usr/include/exodusii -g src/apps/amr.x86_64-alt-linux-gnu.opt.o -o bin/amr-opt -ltbb -ltbbmalloc /usr/src/RPM/BUILD/libmesh-real-0.7.3/lib/x86_64-alt-linux-gnu_opt/libmesh.so /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/liblaspack.so -lparmetis -lparmetis /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/libsfcurves.so -L/usr/lib64 -ltbb -ltbbmalloc /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/libgzstream.so -lz  /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/libgmv.so -Wl,-rpath,/usr/lib -L/usr/lib -lvtkIO -lvtkCommon -lvtkFiltering -L/usr/lib64 -lglpk -ltetgen /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/libtriangle.so -lexoIIv2c -lnetcdf -lnemesis /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/libHilbert.so /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt/libfparser.so    -lmesquite -loptika -lpytrilinos -lctrilinos -lpdeopt -lsundanceStdFwk -lsundanceStdMesh -lsundanceCore -lsundanceInterop -lsundanceUtils -lplaya -lpiro -lstokhos -lmoochothyra -lmoocho -lgaasp -lrythmosgaasp -lrythmos -ltrilinoscouplings -lmoertel -llocathyra -llocaepetra -llocalapack -lloca -lnoxthyra -lnoxepetra -lnoxlapack -lnox -lphalanx -lstk_adapt -lstk_percept -lstk_search_util -lstk_search -lstk_rebalance_utils -lstk_rebalance -lstk_linsys -lstk_io_util -lstk_io -lstk_expreval -lstk_algsup -lstk_mesh_fem -lstk_mesh_base -lstk_util_unit_test_support -lstk_util_parallel -lstk_util_diag -lstk_util_env -lstk_util_util -lintrepid -ltrikota -lteko -lanasazitpetra -lModeLaplace -lanasaziepetra -lanasazi -lfei_trilinos -lfei_base -lstratimikos -lstratimikosbelos -lstratimikosaztecoo -lstratimikosamesos -lstratimikosml -lstratimikosifpack -lifpack2 -lbelostpetra -lbelosepetra -lbelos -lml -lkomplex -lifpack -ltxtexo_app_lib -lmapvar-kd_app_lib -lmapvar_app_lib -lmapvarlib -lgrope_app_lib -lgrepos_app_lib -lgenshell_app_lib -lgen3d_app_lib -lgjoin_app_lib -lexotxt_app_lib -lexomatlab_app_lib -lepu_lib -lejoin_app_lib -lconjoin_app_lib -lsuplib -lsupes -laprepro_lib -lchaco -lIoxf -lIonit -lIotr -lIohb -lIogn -lIopg -lIoex -lIoss -lexodus_for -lexodus -ltxtexo_app_lib -lmapvar-kd_app_lib -lmapvar_app_lib -lmapvarlib -lgrope_app_lib -lgrepos_app_lib -lgenshell_app_lib -lgen3d_app_lib -lgjoin_app_lib -lexotxt_app_lib -lexomatlab_app_lib -lepu_lib -lejoin_app_lib -lconjoin_app_lib -lsuplib -lsupes -laprepro_lib -lchaco -lIoxf -lIonit -lIotr -lIohb -lIogn -lIopg -lIoex -lIoss -lexodus_for -lexodus -lpamgen_extras -lpamgen -lamesos -lgaleri -laztecoo -ldpliris -lisorropia -loptipack -lthyratpetra -lthyraepetraext -lthyraepetra -lthyracore -lthyratpetra -lthyraepetraext -lthyraepetra -lthyracore -lepetraext -ltpetrarti -ltpetraext -ltpetrainout -ltpetra -ltriutils -lglobipack -lshards -lzoltan -lepetra -lkokkoslinalg -lkokkosnodeapi -lkokkos -lrtop -lsacado -ltpi -lteuchos -L/usr/lib /usr/lib64/libQtCore.so /usr/lib64/libQtGui.so /usr/lib64/libQtTest.so /usr/lib64/libQtXml.so /usr/lib64/libskit.so /usr/lib64/openmpi/lib/libhdf5hl_fortran.so /usr/lib64/openmpi/lib/libhdf5_fortran.so /usr/lib64/openmpi/lib/libhdf5_hl.so /usr/lib64/openmpi/lib/libhdf5.so /usr/lib64/libtaucs.so /usr/lib64/oski/liboski_Tid.so /usr/lib64/oski/liboski.so /usr/lib64/libcmumps.so /usr/lib64/libdmumps.so /usr/lib64/libsmumps.so /usr/lib64/libzmumps.so /usr/lib64/libmumps_common.so /usr/lib64/libpord.so /usr/lib64/libesmumps.so /usr/lib64/libscotch.so /usr/lib64/libscotcherr.so /usr/lib64/libscalapack.so /usr/lib64/libblacs.so /usr/lib64/libHYPRE.so /usr/lib64/libamd.so /usr/lib64/libopenblas.so /usr/lib64/libm.so /usr/lib64/libumfpack.so /usr/lib64/libamd.so /usr/lib64/libopenblas.so /usr/lib64/libm.so /usr/lib64/libz.so /usr/lib64/libsuperlu_4.0.so /usr/lib64/libtmglib.so /usr/lib64/libsuperlu_dist_2.4.so /usr/lib64/liby12m.so /usr/lib64/openmpi/lib/libnetcdff.so /usr/lib64/openmpi/lib/libnetcdf_c++4.so /usr/lib64/openmpi/lib/libnetcdf.so /usr/lib64/libXdmf.so /usr/lib64/libXdmfUtils.so /usr/lib64/libvtkXdmf.so /usr/lib64/libvtkXdmfTCL.so /usr/lib64/libnemesis.so /usr/lib64/libexoIIv2c.so /usr/lib64/libnetcdf.so /usr/lib64/libadolc.so /usr/lib64/libparmetis0.so /usr/lib64/libparmetis0.so /usr/lib64/libesmumps.so /usr/lib64/libscotch.so /usr/lib64/libscotcherr.so /usr/lib64/libptscotch.so /usr/lib64/libparmetis0.so /usr/lib64/libz.so /usr/lib64/libm.so /usr/lib64/librt.so /usr/lib64/libpthread.so /usr/lib64/liblapack.so /usr/lib64/libopenblas.so /usr/lib64/liblapack.so /usr/lib64/libopenblas.so /usr/lib64/libqdmod.so /usr/lib64/libqd.so /usr/lib64/libqd_f_main.so /usr/lib64/libarprecmod.so /usr/lib64/libarprec.so /usr/lib64/libarprec_f_main.so /usr/lib64/libpthread.so /usr/lib64/libtbb.so /usr/lib64/libtbbmalloc.so -L/usr/lib64 -L/usr/lib64/petsc-real/lib -L/usr/lib64 -lparpack_MPI-LINUX -lscalapack -larpack_LINUX -lblacs -Wl,-rpath,/usr/lib64/petsc-real/lib -L/usr/lib  -lpetsc -lzoltan -ltriangle -lX11 -ltetgen -lsundials_cvode -lsundials_nvecparallel -lcmrg -llcg64 -llcg -llfg -lmlfg -lspoolesMPI -lspooles -lspai -lpthread -lsuperlu_dist_2.4 -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lesmumps -lptscotch -lscotch -lscotcherr -lparmetis -lparmetis -lparms -loski -loski_Tid -llmpe -lmpe -lml -lamesos -lepetraext -lifpack -laztecoo -lepetra -lteuchos -ly12m -lHYPRE -lgomp -lexpat -lscalapack -lblacs -larpack_LINUX -lblacs -ltmglib -lsuperlu_4.0 -lpastix_d -lpastix -lparmetis -lptscotch -lrt -lesmumps -lptscotch -lptscotcherr -lPLAPACK -lchaco2 -lumfpack -lamd -lxerbla -llapack -lopenblas -lnetcdf_c++ -lnetcdf -lhdf5_fortran -lhdf5 -lz -Wl,-rpath,/usr -L/usr -Wl,-rpath,/usr/lib64/oski -L/usr/lib64/oski -Wl,-rpath,/usr/lib64/openmpi/lib -L/usr/lib64/openmpi/lib -Wl,-rpath,/usr/lib64/gcc/x86_64-alt-linux/4.6.3 -L/usr/lib64/gcc/x86_64-alt-linux/4.6.3 -lgfortran -lm -lgfortran -lm -lgfortran -lm -lgfortran -lm -lm -lm -lquadmath -lm -lmpi_cxx -lstdc++ -ldl -llmpe -lmpe -lmpi_f90 -lmpi_f77 -lmpi -lrt -lnsl -lutil -lgcc_s -lpthread -ldl -llmpe -lmpe    -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/lib/x86_64-alt-linux-gnu_opt -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt -L/usr/lib64/petsc-real/lib -Wl,-rpath,/usr/lib64/petsc-real/lib   -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/lib/x86_64-alt-linux-gnu_opt -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/x86_64-alt-linux-gnu_opt -L/usr/lib64/petsc-real/lib -Wl,-rpath,/usr/lib64/petsc-real/lib 
/usr/bin/ld: src/apps/amr.x86_64-alt-linux-gnu.opt.o: undefined reference to symbol 'boost::system::system_category()'
/usr/bin/ld: note: 'boost::system::system_category()' is defined in DSO /usr/lib64/libboost_system.so.1.51.0 so try adding it to the linker command line
2012-Sep-11 16:32:24 :: [x86_64] libmesh.git real-0.7.3-alt3.svn20120228: remote: build failed
2012-Sep-11 16:32:24 :: [x86_64] #100 libmesh.git real-0.7.3-alt3.svn20120228: build FAILED
mpicxx -DNDEBUG -g  -g -DHAVE_CONFIG_H -DPETSC_USE_DYNAMIC_LIBRARIES -O2 -felide-constructors -fPIC -funroll-loops -fstrict-aliasing -Wdisabled-optimization -g -pipe -Wall -g -O2 -march=i586 -mtune=i686 -DOMPI_IGNORE_CXX_SEEK -DHAVE_NOX -I/usr/include/exodusii -g src/apps/amr.i586-alt-linux-gnu.opt.o -o bin/amr-opt -ltbb -ltbbmalloc /usr/src/RPM/BUILD/libmesh-real-0.7.3/lib/i586-alt-linux-gnu_opt/libmesh.so /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/liblaspack.so -lparmetis -lparmetis /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/libsfcurves.so -L/usr/lib -ltbb -ltbbmalloc /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/libgzstream.so -lz  /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/libgmv.so -Wl,-rpath,/usr/lib -L/usr/lib -lvtkIO -lvtkCommon -lvtkFiltering -L/usr/lib -lglpk -ltetgen /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/libtriangle.so -lexoIIv2c -lnetcdf -lnemesis /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/libHilbert.so /usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt/libfparser.so    -lmesquite -loptika -lpytrilinos -lctrilinos -lpdeopt -lsundanceStdFwk -lsundanceStdMesh -lsundanceCore -lsundanceInterop -lsundanceUtils -lplaya -lpiro -lstokhos -lmoochothyra -lmoocho -lgaasp -lrythmosgaasp -lrythmos -ltrilinoscouplings -lmoertel -llocathyra -llocaepetra -llocalapack -lloca -lnoxthyra -lnoxepetra -lnoxlapack -lnox -lphalanx -lstk_adapt -lstk_percept -lstk_search_util -lstk_search -lstk_rebalance_utils -lstk_rebalance -lstk_linsys -lstk_io_util -lstk_io -lstk_expreval -lstk_algsup -lstk_mesh_fem -lstk_mesh_base -lstk_util_unit_test_support -lstk_util_parallel -lstk_util_diag -lstk_util_env -lstk_util_util -lintrepid -ltrikota -lteko -lanasazitpetra -lModeLaplace -lanasaziepetra -lanasazi -lfei_trilinos -lfei_base -lstratimikos -lstratimikosbelos -lstratimikosaztecoo -lstratimikosamesos -lstratimikosml -lstratimikosifpack -lifpack2 -lbelostpetra -lbelosepetra -lbelos -lml -lkomplex -lifpack -ltxtexo_app_lib -lmapvar-kd_app_lib -lmapvar_app_lib -lmapvarlib -lgrope_app_lib -lgrepos_app_lib -lgenshell_app_lib -lgen3d_app_lib -lgjoin_app_lib -lexotxt_app_lib -lexomatlab_app_lib -lepu_lib -lejoin_app_lib -lconjoin_app_lib -lsuplib -lsupes -laprepro_lib -lchaco -lIoxf -lIonit -lIotr -lIohb -lIogn -lIopg -lIoex -lIoss -lexodus_for -lexodus -ltxtexo_app_lib -lmapvar-kd_app_lib -lmapvar_app_lib -lmapvarlib -lgrope_app_lib -lgrepos_app_lib -lgenshell_app_lib -lgen3d_app_lib -lgjoin_app_lib -lexotxt_app_lib -lexomatlab_app_lib -lepu_lib -lejoin_app_lib -lconjoin_app_lib -lsuplib -lsupes -laprepro_lib -lchaco -lIoxf -lIonit -lIotr -lIohb -lIogn -lIopg -lIoex -lIoss -lexodus_for -lexodus -lpamgen_extras -lpamgen -lamesos -lgaleri -laztecoo -ldpliris -lisorropia -loptipack -lthyratpetra -lthyraepetraext -lthyraepetra -lthyracore -lthyratpetra -lthyraepetraext -lthyraepetra -lthyracore -lepetraext -ltpetrarti -ltpetraext -ltpetrainout -ltpetra -ltriutils -lglobipack -lshards -lzoltan -lepetra -lkokkoslinalg -lkokkosnodeapi -lkokkos -lrtop -lsacado -ltpi -lteuchos -L/usr/lib /usr/lib/libQtCore.so /usr/lib/libQtGui.so /usr/lib/libQtTest.so /usr/lib/libQtXml.so /usr/lib/libskit.so /usr/lib/openmpi/lib/libhdf5hl_fortran.so /usr/lib/openmpi/lib/libhdf5_fortran.so /usr/lib/openmpi/lib/libhdf5_hl.so /usr/lib/openmpi/lib/libhdf5.so /usr/lib/libtaucs.so /usr/lib/oski/liboski_Tid.so /usr/lib/oski/liboski.so /usr/lib/libcmumps.so /usr/lib/libdmumps.so /usr/lib/libsmumps.so /usr/lib/libzmumps.so /usr/lib/libmumps_common.so /usr/lib/libpord.so /usr/lib/libesmumps.so /usr/lib/libscotch.so /usr/lib/libscotcherr.so /usr/lib/libscalapack.so /usr/lib/libblacs.so /usr/lib/libHYPRE.so /usr/lib/libamd.so /usr/lib/libopenblas.so /usr/lib/libm.so /usr/lib/libumfpack.so /usr/lib/libamd.so /usr/lib/libopenblas.so /usr/lib/libm.so /usr/lib/libz.so /usr/lib/libsuperlu_4.0.so /usr/lib/libtmglib.so /usr/lib/libsuperlu_dist_2.4.so /usr/lib/liby12m.so /usr/lib/openmpi/lib/libnetcdff.so /usr/lib/openmpi/lib/libnetcdf_c++4.so /usr/lib/openmpi/lib/libnetcdf.so /usr/lib/libXdmf.so /usr/lib/libXdmfUtils.so /usr/lib/libvtkXdmf.so /usr/lib/libvtkXdmfTCL.so /usr/lib/libnemesis.so /usr/lib/libexoIIv2c.so /usr/lib/libnetcdf.so /usr/lib/libadolc.so /usr/lib/libparmetis0.so /usr/lib/libparmetis0.so /usr/lib/libesmumps.so /usr/lib/libscotch.so /usr/lib/libscotcherr.so /usr/lib/libptscotch.so /usr/lib/libparmetis0.so /usr/lib/libz.so /usr/lib/libm.so /usr/lib/librt.so /usr/lib/libpthread.so /usr/lib/liblapack.so /usr/lib/libopenblas.so /usr/lib/liblapack.so /usr/lib/libopenblas.so /usr/lib/libqdmod.so /usr/lib/libqd.so /usr/lib/libqd_f_main.so /usr/lib/libarprecmod.so /usr/lib/libarprec.so /usr/lib/libarprec_f_main.so /usr/lib/libpthread.so /usr/lib/libtbb.so /usr/lib/libtbbmalloc.so -L/usr/lib -L/usr/lib/petsc-real/lib -L/usr/lib -lparpack_MPI-LINUX -lscalapack -larpack_LINUX -lblacs -Wl,-rpath,/usr/lib/petsc-real/lib -L/usr/lib  -lpetsc -lzoltan -ltriangle -lX11 -ltetgen -lsundials_cvode -lsundials_nvecparallel -lcmrg -llcg64 -llcg -llfg -lmlfg -lspoolesMPI -lspooles -lspai -lpthread -lsuperlu_dist_2.4 -lcmumps -ldmumps -lsmumps -lzmumps -lmumps_common -lpord -lesmumps -lptscotch -lscotch -lscotcherr -lparmetis -lparmetis -lparms -loski -loski_Tid -llmpe -lmpe -lml -lamesos -lepetraext -lifpack -laztecoo -lepetra -lteuchos -ly12m -lHYPRE -lgomp -lexpat -lscalapack -lblacs -larpack_LINUX -lblacs -ltmglib -lsuperlu_4.0 -lpastix_d -lpastix -lparmetis -lptscotch -lrt -lesmumps -lptscotch -lptscotcherr -lPLAPACK -lchaco2 -lumfpack -lamd -lxerbla -llapack -lopenblas -lnetcdf_c++ -lnetcdf -lhdf5_fortran -lhdf5 -lz -Wl,-rpath,/usr -L/usr -Wl,-rpath,/usr/lib/oski -L/usr/lib/oski -Wl,-rpath,/usr/lib/openmpi/lib -L/usr/lib/openmpi/lib -Wl,-rpath,/usr/lib/gcc/i586-alt-linux/4.6.3 -L/usr/lib/gcc/i586-alt-linux/4.6.3 -lgfortran -lm -lgfortran -lm -lgfortran -lm -lgfortran -lm -lm -lm -lquadmath -lm -lmpi_cxx -lstdc++ -ldl -llmpe -lmpe -lmpi_f90 -lmpi_f77 -lmpi -lrt -lnsl -lutil -lgcc_s -lpthread -ldl -llmpe -lmpe    -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/lib/i586-alt-linux-gnu_opt -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt -L/usr/lib/petsc-real/lib -Wl,-rpath,/usr/lib/petsc-real/lib   -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/lib/i586-alt-linux-gnu_opt -Wl,-rpath,/usr/src/RPM/BUILD/libmesh-real-0.7.3/contrib/lib/i586-alt-linux-gnu_opt -L/usr/lib/petsc-real/lib -Wl,-rpath,/usr/lib/petsc-real/lib 
/usr/bin/ld: src/apps/amr.i586-alt-linux-gnu.opt.o: undefined reference to symbol 'boost::system::system_category()'
/usr/bin/ld: note: 'boost::system::system_category()' is defined in DSO /usr/lib/libboost_system.so.1.51.0 so try adding it to the linker command line
2012-Sep-11 16:34:14 :: [i586] libmesh.git real-0.7.3-alt3.svn20120228: remote: build failed
2012-Sep-11 16:34:14 :: [i586] #100 libmesh.git real-0.7.3-alt3.svn20120228: build FAILED
2012-Sep-11 16:32:24 :: [x86_64] build FAILED
2012-Sep-11 16:34:14 :: [i586] build FAILED
2012-Sep-11 16:34:14 :: task #79676 for sisyphus FAILED