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From: Sergey Afonin <asy@altlinux.org>
To: ALT Linux Team development discussions <devel@lists.altlinux.org>
Date: Wed, 10 Apr 2019 18:32:54 +0400
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Subject: Re: [devel] I: automake default is 1.16
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On Wednesday 10 April 2019, Dmitry V. Levin wrote:

> > Нет, не помогает перенос AC_CONFIG_AUX_DIR до AC_PROG_... .
> 
> Значит надо ещё раньше перенести, сразу после AC_INIT,
> чтобы было до первого использования.

Что-то полтергейст какой-то. Там исходно 

AC_PREREQ([2.59])
dnl For a release change [devel] to the real version [0.xy]
dnl also change VERSION below
AC_INIT([ClamAV], [0.101.2], [https://bugzilla.clamav.net/], [clamav], [https://www.clamav.net/])

dnl enable C++
AC_PROG_CXX()

Так что сразу после AC_INIT и переставлял - вариантов не было.
Но собирается сейчас. 

-- 
С уважением, Сергей Афонин.